Welcome to MineSV’s documentation!

Getting started

• Overview
  • I. Description
  • II. A little history about MineSV
  • III. Dependencies
  • IV. Analysis modes
  • V. Run modes
  • VI. Callers available
• User’s guide
  • I. Input requirements
  • II. Sample file formats
  • III. Comparison and annotation
  • IV. Editing the config.yaml
  • V. To run
  • VI. To monitor pipeline
  • VI. Output
• Developer’s guide
  • I. Pipeline architecture
  • II. To add callers
• Citations

Cookbook

• Run MineSV demo at Biowulf

Indices and tables

• Index

• Module Index

• Search Page